Was the lotus a new plant you purchased? Did you "quarantine" the plant before putting it in your pond?
It was brand new, but was just the bare root when it came. And it was planted in the pot for about 5 or 6 weeks before it went in the pond. (We put the whole thing, pot and all, right into the pond.) We always wait for the lotuses to get a good head start before they go in the pond - otherwise the fish just yank them out of the pot. I don't think a bare root plant would carry anything parasitic, but we did have the thought that maybe it had to be sprayed with something to get through customs to be shipped here? That's probably a big stretch though... and even if it did, the water was changed in the pot numerous times before the plant went into the pond. But we are literally considering all possibilities!
Oh, I am sorry that you lost all your fish! It is so frustrating and sad! I dread walking out to the pond right now, for fear of what I will find. Like I said, our neighbor does spray his weeds, but he's a good 30 feet from the pond when he does and he does try to be very careful. I will mention it to him the next time I see him, but since our garden is not showing any signs of overspray, I really doubt that we got anything from his yard.