So, water chemistry doesn't seem to be an issue at the moment! That's good. That means their immune systems have a better fighting chance.
That black comet's body doesn't look right to me... It does look like it has a thick slime coat (which crud can get stuck to very easily) and is a sign of stress/disease. However, I am more concerned with the bloating. See how the way that the roundness starts right behind the gill plate? Common and comet goldfish usually have very gently tapered bodies that do not bulge out like that. It could be the early stages of dropsy. If the scales behind the gill plate (or any others, for that matter) start to rise up like a pinecone, and you still haven't found a cause for the disease, you'll want to treat with antibiotics right away. I usually start with Metroplex when treating dropsy.
Dark red patch on the fantail's side could be an ulcer (which would be another important symptom) or it could be a scrape from rubbing against something sharp (or even from being wounded by a predator).
If it were me, I would put that comet in a quarantine tank and do salt treatments help with the slime coat, and try to get a closer look at all the potential symptoms.
How's the water temperature been this month?